Epiphyte Biodiversity in the Coffee Agricultural Matrix: Canopy Stratification and Distance from Forest Fragments

Abstract: Quality of the agricultural matrix profoundly affects biodiversity and dispersal in agricultural areas. Vegetatively complex coffee agroecosystems maintain species richness at larger distances from the forest. Epiphytes colonize canopy trees and provide resources for birds and insects and thus effects of agricultural production on epiphytes may affect other species. We compared diversity, composition, and vertical stratification of epiphytes in a forest fragment and in two coffee farms differing in management intensity in southern Mexico. We also examined spatial distribution of epiphytes with respect to the forest fragment to examine quality of the two agricultural matrix types for epiphyte conservation. We sampled vascular epiphytes in a forest fragment, a shade polyculture farm, and a shade monoculture farm at 100 m, 200 m, and 400 m from the forest. Epiphyte and orchid richness was greater in the forest than in the monoculture but richness was similar in the forest and polyculture farm. Epiphyte species composition differed with habitat type, but not with distance from the forest. In the forest, epiphytes were distributed throughout tree canopies, but in the farms, epiphytes were primarily found on trunks and larger branches. Epiphyte richness and species similarity to forest species declined with distance from the forest fragment in the monoculture, but richness and similarity to forest species did not decline with distance from forest in the polyculture. This suggests polyculture coffee has greater conservation value. In contrast, monoculture coffee is likely a sink habitat for epiphytes dispersing from forests into coffee. Coffee farms differ from forests in terms of the habitat they provide and species composition, thus protecting forest fragments is essential for epiphyte conservation. Nonetheless, in agricultural landscapes, vegetatively complex coffee farms may contribute to conservation of epiphytes more than other agricultural land uses.     

Measurement of Genetic Variation in Endangered Populations: Bandicoots (Marsupialia: Peramelidae) as an Example

Abstract. Attempts to monitor the genetic variation of endangered populations by the use of blood protein electrophoresis often suffer from three drawbacks: a small sample of loci, lack of control populations with "normal" variation, and, sometimes, difficulty in confirming inheritance of electromorphs.
An endangered isolate (Hamilton, Victoria) of the eastern barred bandicoot, Perameles gunnii, was compared with a widespread, dense, conspecific population in Tasmania. A previous study of the effective size of the siolate suggested that the loss of variation should be detectable by protein electrophoresis if average heterozygosity () was approximately 0.057 in widespread, dense populations and 20 to 50 individuals from each population were analysed for 25 or more loci. However, no genetic variation was detected within or between samples.
Similar studies proposed as a baseline for monitioring genetic variation could be equally powerless to detect changes in variation, even with quite high values. The analysis of variation in DNA is expected to avoid many of the problems associated with blood protein studies.
This study highlights the importance of a control population. Analysis of the Hamilton population alone might have led us to concludce that the recent population crash has been responsible for the low variation; however, this conclusion is not warranted, because = 0 in the much larger Tasmania population.     

景观规划导向的绿色基础设施研究进展——基于“格局—过程—服务—可持续性”研究范式

中国目前处于新型城镇化与生态文明建设的重要时期,引入绿色基础设施（Green Infrastructure,GI）规划框架对协调城市发展与生态保护具有重要意义。基于景观生态学中“格局—过程—服务—可持续性”研究范式,对近年来中国内外GI规划进行针对性综述,利用该范式对相关研究的理论来源与进展进行梳理。研究表明：GI格局研究中,景观格局指数是应用最为广泛的方法。针对于景观连接度,形态学空间格局分析等结构连接度评价方法具有计算简单、适用性广的优势,但缺乏明确的生态学含义;图论等功能连接度则针对特定的生态过程,是GI格局与生态过程的重要联系,将是下一步研究重点。GI生态过程研究借鉴生态网络的理论与方法,其规划步骤可分为核心区选取、阻力面构建、潜在廊道识别三部分。GI生态系统服务研究中,生物物理量模型与经济计量模型广泛应用于调节、供给与支持服务评价中,而文化服务评价则将问卷调查作为基础数据获取的重要途径。另外,生态系统服务需求研究涉及到生态系统服务的实际需求与使用偏好,相关定量评价方法以及成果的实际应用有待进一步探索。GI景观可持续性研究中,在明晰GI提供的生态系统服务总量的基础上,服务间权衡与协同效应已成为GI规划中的重要考量,而情景规划可以有效模拟GI生态系统服务的动态变化。最后,GI规划应将提升景观可持续性作为规划目标,据此研究提出了重视格局与过程相互影响机制的基础研究、加深GI生态系统服务需求端研究、明晰生态系统服务间协同与权衡效应、将GI与实际规划结合四项研究展望。     

Incorporating Uncertainty of Management Costs in Sensitivity Analyses of Matrix Population Models

The importance of accounting for economic costs when making environmental‐management decisions subject to resource constraints has been increasingly recognized in recent years. In contrast, uncertainty associated with such costs has often been ignored. We developed a method, on the basis of economic theory, that accounts for the uncertainty in population‐management decisions. We considered the case where, rather than taking fixed values, model parameters are random variables that represent the situation when parameters are not precisely known. Hence, the outcome is not precisely known either. Instead of maximizing the expected outcome, we maximized the probability of obtaining an outcome above a threshold of acceptability. We derived explicit analytical expressions for the optimal allocation and its associated probability, as a function of the threshold of acceptability, where the model parameters were distributed according to normal and uniform distributions. To illustrate our approach we revisited a previous study that incorporated cost‐efficiency analyses in management decisions that were based on perturbation analyses of matrix population models. Incorporating derivations from this study into our framework, we extended the model to address potential uncertainties. We then applied these results to 2 case studies: management of a Koala (Phascolarctos cinereus) population and conservation of an olive ridley sea turtle (Lepidochelys olivacea) population. For low aspirations, that is, when the threshold of acceptability is relatively low, the optimal strategy was obtained by diversifying the allocation of funds. Conversely, for high aspirations, the budget was directed toward management actions with the highest potential effect on the population. The exact optimal allocation was sensitive to the choice of uncertainty model. Our results highlight the importance of accounting for uncertainty when making decisions and suggest that more effort should be placed on understanding the distributional characteristics of such uncertainty. Our approach provides a tool to improve decision making.     

Effects of Spatially Extensive Control of Invasive Rats on Abundance of Native Invertebrates in Mainland New Zealand Forests

Predation on native fauna by non‐native invasive mammals is widely documented, but effects of predation at the population level are rarely measured. Eradication of invasive mammals from islands has led to recovery of native biota, but the benefits of controlling invasive mammal populations in settings where eradication is not feasible are less understood. We used various combinations of aerially delivered toxic bait and control measures on the ground to reduce abundances of invasive rats (Rattus rattus) to low levels over large areas on mainland New Zealand and then monitored the abundance of invertebrates on replicated treatment sites to compare with abundances on similar nontreatment sites. We also assessed rat diet by examining stomach contents. Abundance of the rats’ most‐consumed invertebrate prey item, the large‐bodied Auckland tree weta (Hemideina thoracica), increased 3‐fold on treatment sites where we maintained rats at <4/ha for approximately 3 years, compared with the nontreatment sites. Auckland tree weta also increased in abundance on sites where rats were controlled with a single aerial‐poisoning operation, but rat abundance subsequently increased on these sites and tree weta abundance then declined. Nevertheless, our data suggest that biennial reduction of rat abundances may be sufficient to allow increases in tree weta populations. Other invertebrates that were consumed less often (cave weta [Rhaphidophoridae], spiders [Araneae], and cockroaches [Blattodea]) showed no systematic changes in abundance following rat control. Our results suggest that the significant threat to recruitment and individual survival that predation by rats poses for tree weta can be mitigated by wide‐scale aerial pest control. Efectos del Control Extensivo Espacial de Ratas Invasoras sobre la Abundancia de Invertebrados Nativos en Bosques de Nueva Zelanda